Author Archives: Ben
Cryo-EM
Of course I also have to write something about Cryo-EM in my thesis for this I found the following video to be a nice summary: This is especially usefull because of the papers listed in the description (as in any … Continue reading
Posted in Methods
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Some videos on X-ray crystallography
As I am writing the fundamentals part of my Thesis I have to read up on a lot of stuff, like fore example the experimental methods for getting a protein structure. And although the new “hot” method for this is … Continue reading
Posted in Methods
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Very nice online Seminar about Alphafold2/RosettaFold
This really helped me understand a bit more about the differences between AlphaFold1 to AlphaFold2 and RosettaTR to RoseTTAFold respectively. Very cool, if somewhat long talk (well its a seminar ^^). Particularly interesting is the performance comparison between the different … Continue reading
Posted in Uncategorized
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Rescoring Poses in Rosetta
This is going to be a very Rosetta specific article, if you haven’t used it before this probably is not for you. In short: I recently had to do a lot of simulations in Rosetta, ranging from simple relaxations over … Continue reading
Posted in Computational Biology
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Start of Blog
I am in the process of customizing and starting this blog. As the note suggest I am planning to write about various subjects I encountered during the work for my PhD, which in short is: How to waste a lot of … Continue reading
Posted in entropy
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